Bioinformatics

High-Accuracy RNA Integrity Definition for Unbiased Transcriptome Comparisons with INDEGRA

High-Accuracy RNA Integrity Definition for Unb...

Bioinformatics
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librarian
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Deciphering Colorectal Cancer-Hepatocyte Interactions: A Multiomic Platform for Interrogation of Metabolic Crosstalk in the Liver-Tumor Microenvironment

Deciphering Colorectal Cancer-Hepatocyte Inter...

Bioinformatics
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librarian
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Convolutional-LSTM Approach for Temporal Catch Hotspots (CATCH): An AI-Driven Model for Spatiotemporal Forecasting of Fisheries Catch Probability Densities

Convolutional-LSTM Approach for Temporal Catch...

Bioinformatics
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librarian
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scPDA: Denoising Protein Expression in Droplet-Based Single-Cell Data

scPDA: Denoising Protein Expression in Droplet...

Bioinformatics
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librarian
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Simulating the diffusion of PPR-like disease to improve surveillanc

Simulating the diffusion of PPR-like disease t...

Bioinformatics
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librarian
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OrthoHMM: Improved Inference of Ortholog Groups using Hidden Markov Models

OrthoHMM: Improved Inference of Ortholog Group...

Bioinformatics
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librarian
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Small Extracellular Vesicles Isolated from Cardiac Tissue Matrix or Plasma Display Distinct Aging-Related Changes in Cargo Contributing to Chronic Cardiovascular Disease

Small Extracellular Vesicles Isolated from Car...

Bioinformatics
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Pinar Zorlutuna
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inVAE: Conditionally invariant representation learning for generating multivariate single-cell reference maps

inVAE: Conditionally invariant representation ...

Bioinformatics
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librarian
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Efficient High-Throughput DNA Breathing Features Generation Using Jax-EPBD

Efficient High-Throughput DNA Breathing Featur...

Bioinformatics
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librarian
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PlateletBase: A Comprehensive Knowledgebase for Platelet Research and Disease Insights

PlateletBase: A Comprehensive Knowledgebase fo...

Bioinformatics
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librarian
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Depositing biological segmentation datasets FAIRly

Depositing biological segmentation datasets FAIRly

Bioinformatics
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librarian
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Yeast Knowledge Graphs Database for Exploring Saccharomyces cerevisiae and Schizosaccharomyces pombe

Yeast Knowledge Graphs Database for Exploring ...

Bioinformatics
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Guillaume Thibault
8 views
Deciphering enzymatic potential in metagenomic reads through DNA language model

Deciphering enzymatic potential in metagenomic...

Bioinformatics
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librarian
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Learning from and improving upon high-throughputscreens for protein fitness with Generative AI - Application to BBB-crossing AAV design

Learning from and improving upon high-throughp...

Bioinformatics
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librarian
6 views
PathoFact 2.0: An Integrative Pipeline for Predicting Antimicrobial Resistance Genes, Virulence Factors, Toxins and Biosynthetic Gene Clusters in Metagenomes

PathoFact 2.0: An Integrative Pipeline for Pre...

Bioinformatics
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librarian
3 views
Protein language model pseudolikelihoods capture features of in vivo B cell selection and evolution

Protein language model pseudolikelihoods captu...

Bioinformatics
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librarian
4 views
DDI-GPT: Explainable Prediction of Drug-Drug Interactions using Large Language Models enhanced with Knowledge Graphs

DDI-GPT: Explainable Prediction of Drug-Drug I...

Bioinformatics
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librarian
14 views
CASSIA allows for robust, automated cell annotation in single-cell RNA-sequencing data

CASSIA allows for robust, automated cell annot...

Bioinformatics
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Elliot Xie
13 views
ProkBERT PhaStyle: Accurate Phage Lifestyle Prediction with Pretrained Genomic Language Models

ProkBERT PhaStyle: Accurate Phage Lifestyle Pr...

Bioinformatics
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librarian
4 views
Bayesian Perspective for Orientation Estimation in Cryo-EM and Cryo-ET

Bayesian Perspective for Orientation Estimatio...

Bioinformatics
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Sheng Xu
6 views
MerQuaCo: a computational tool for quality control in image-based spatial transcriptomics

MerQuaCo: a computational tool for quality con...

Bioinformatics
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librarian
4 views
Integration of diverse bioactivity data into the Chemical Checker compound universe

Integration of diverse bioactivity data into t...

Bioinformatics
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Patrick Aloy
5 views
Prediction of peptide structural conformations with AlphaFold2

Prediction of peptide structural conformations...

Bioinformatics
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librarian
13 views
GRU-SCANET: Unleashing the Power of GRU-based Sinusoidal CApture Network for Precision-driven Named Entity Recognition

GRU-SCANET: Unleashing the Power of GRU-based ...

Bioinformatics
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librarian
3 views
A ML Framework for Genetic Sequence Identification using 2D Electrical Conductance Probability Distributions from Mixed Data Sets

A ML Framework for Genetic Sequence Identifica...

Bioinformatics
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M. P. Anantram
4 views
GraphVelo allows inference of multi-modal single cell velocities and molecular mechanisms

GraphVelo allows inference of multi-modal sing...

Bioinformatics
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librarian
2 views
Cell Type Differentiation Using Network Clustering Algorithms

Cell Type Differentiation Using Network Cluste...

Bioinformatics
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librarian
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Comparative analysis of CRISPR/Cas9-targeted nanopore sequencing approaches in repeat expansion disorders

Comparative analysis of CRISPR/Cas9-targeted n...

Bioinformatics
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Louise Benarroch
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RIDDEN: Data-driven inference of receptor activity from transcriptomic data

RIDDEN: Data-driven inference of receptor acti...

Bioinformatics
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Ben Szalai
3 views
Drug Response Modeling across Cancers: Proteomics vs. Transcriptomics

Drug Response Modeling across Cancers: Proteom...

Bioinformatics
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librarian
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Prediction and annotation of alternative transcription starts and promoter shift in the chicken genome

Prediction and annotation of alternative trans...

Bioinformatics
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librarian
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Protein2Text: Providing Rich Descriptions for Protein Sequences

Protein2Text: Providing Rich Descriptions for ...

Bioinformatics
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librarian
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